Surface area calculations (ACCESS)

• Introduction.
• Initialize accessibility information (INIACC)
• Statistics about accessibilities (SHOACC)
• Calculate accessibilities (SETACC)
• The environment
  • Defining a new environment (INIENV)
  • Listing the environment (SHOENV)
• Other accessibility calculations
  • Relative accessibility (VACACC)
  • Accessibility of the C-beta (ACCALA)
• Surface analysis
  • Analyze the surface (ANASRF)
  • Differential accessibility calculations (DIFACC)
• Store residue accessibilities in a table (TABACC)
• Displaying surfaces
  • Accessible or molecular surface display (GRAACC)
  • Van der Waals surface display (GRAVDD)
• Parameters for accessibility calculations
  • Showing parameters (SHOPAR)
  • Changing parameters (PARAMS)
    • Precision of the calculation (ACPREC)
    • Radius of the probe (WATRAD)
    • Contribution to accessibility (OUTACC)
    • Surface calculation type (ACCTYP)
    • Limit for being buried (LIMBUR)
    • Exclude own molecule from calculation (USESLF)
• Algorithm
• Activating more commands (MORE)
• Other (hidden) commands
  • Hidden command (DEBUG)