# solve.com -- take 1 mad dataset and solve it # CCP4_OPEN environmental variable set to UNKNOWN so file overwriting will work setenv CCP4_OPEN UNKNOWN solve <<*** @solve.setup ! get our standard information read in logfile solve.logfile ! write out most information to this file. readformatted ! alternatives are readdenzo, readtrek premerged ! alternative is unmerged read_intensities ! alternative is read_amplitudes refscattfactors ! alternative is fixscattfactors mad_atom se lambda 1 label set 1 with 2 se atoms, lambda 1 wavelength .9782 ! wavelength value fprimv_mad -10 ! f' value at this wavelength fprprv_mad 3 ! f doubleprime value rawmadfile lam1.intensities ! datafile ATOMNAME Se ! we're about to enter data on an atom lambda 2 wavelength 0.977865 fprimv_mad -7.5 fprprv_mad 5 rawmadfile lam2.intensities lambda 3 wavelength 0.8856 fprimv_mad -2 fprprv_mad 3.5 rawmadfile lam3.intensities nres 80 nanomalous 2 ! scale_mad analyze_mad solve !--------all done---------- ***