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MOLMOL Manual
The program is supplied with a shell script that processes options and arguments and sets the necessary environment variables. The following options are recognized by this shell script:
argument | description |
---|---|
| give list of options |
| TTY interface (no graphics) |
| alternate input/output device |
| stereo mode (OpenGL only) |
| display all atoms instead of backbone |
| superimpose complete backbone |
| superimpose backbone of given range |
| execute macro file ( |
files | DG, PDB, Angle or Dump files |
If the program is started without names of structure files, it will recover the saved state of the last invocation and neglect all options but -f macro
.
Besides the listed options, the program will also recognize standard Xt options, like -bg color
for setting the background color.
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